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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11604580 chr11:93852880 G/A 4.95E-5 489 15.33 16.73 8.42 KM Plot
THCA rs11606049 chr11:112033129 C/T 3.31E-5 488 16.17 16.3 12.37 KM Plot
THCA rs116078062 chr19:43566948 G/C 0.000246 487 15.32 18.3 10.08 KM Plot
THCA rs11607950 chr11:57107361 C/G 5.92E-11 481 16.27 14.73 17.78 KM Plot
THCA rs11609797 chr12:69602507 T/C 0 481 16.02 15.65 7.77 KM Plot
THCA rs116148146 chr2:29027721 C/G 0.000107 485 15.9 16.33 14.98 KM Plot
THCA rs116151618 chr9:132292804 G/A 0 485 16.13 15.17 9.57 KM Plot
THCA rs116164723 chr16:2954891 C/T 0.000181 483 15.47 17 15.4 KM Plot
THCA rs11621353 chr14:24736669 G/A 1.21E-6 485 15.9 15.63 17.13 KM Plot
THCA rs11625856 chr14:24143409 C/T 0.000241 490 16.37 14.72 10.6 KM Plot
THCA rs11626191 chr14:24736574 A/C 1.21E-6 485 15.9 15.63 17.13 KM Plot
THCA rs116271595 chr3:127634245 C/A 0 487 16.33 14.97 6.03 KM Plot
THCA rs116328709 chr3:56638641 C/G 4.01E-6 486 16.87 12.53 8.47 KM Plot
THCA rs11634095 chr15:89050925 C/A 1.2E-10 484 16.48 15.17 12.83 KM Plot
THCA rs11637182 chr15:89040503 C/T 9.55E-15 481 16.57 15.25 11.48 KM Plot